Protein Input Instructions

No more than 120 characters per line.
Single-letter residue codes
Arbitrary white spaces in between residues
Character b,j,o,u,x, and z are treated as unknown residues
Multiple proteins are allowed, use FASTA format
The following is an example of the appropriate format:

Output Format:

All 3 probabilities

Most probable secondary structure

Most probable secondary structure with its probability

Eye Friendly: Sequence follwed by prediction in rows

>RS10_BACSU P21471 bacillus subtilis. 30s ribosomal protein s10 (bs13) (fragment). 2/95
AKQKIRIRLKAYDHRILBZSAZKIVZTA
>RS10_CRYPH P19460 cryptomonas phi. 30s ribosomal protein s10. 8/92
MQKQKIRIRLKGYETNLLLDSCNKIIETATRTNSVTAGPIPLPTRRKIYCVLRSPHVNKD
SREHFETRIHKRVIDIYEPNSTTIDSLMQLDLPAGIDIDIKI
>RS10_CYAPA P17009 cyanophora paradoxa. 30s ribosomal protein s10. 8/92
MASNQQLKIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLRSPHV
DKDSREHFEIRVHRRIIDLYLPSSKTIDTLTRLDLPAGVDVEVKL
>RS10_DESMO P41207 desulfurococcus mobilis. 30s ribosomal protein s10 (fragment). 2/95
MVKIKIWSTNVKVLDDFVGKITDIVKKTGVRMDGPIPLPTKRMKIRTMKLPHGEGKKKYE
KWEMR
>RS10_ECOLI P02364 escherichia coli. 30s ribosomal protein s10. 2/95
MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD
ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG
>RS10_HALMA P23357 haloarcula marismortui (halobacterium marismortui). 30s ribosomal protein s10 (hmas10). 4/93
SQQARVRLAGTSPEDLDDICADVREIANKTGVELSGPVPLPTKTLEVPSRKSPDGEGTAT
WEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIR
>RS10_METVA P14039 methanococcus vannielii. 30s ribosomal protein s10. 8/92
MQKARIKLSSTKHEELDSVCNQIKAIAEKTGVDMAGPIPLPTKSLKITTRKSTDGEGSSS
FDRWTMRVHKRVIDIEADERTMKHIMKVKNS
>RS10_MYCCA P10129 mycoplasma capricolum. 30s ribosomal protein s10. 8/92
MAENKMRIKLKGYDHAIVDQSITKIIQAAEGTGAKVRGPIPLPTEKQVITILRAVHKYKD
SREQFEMRTHKRLLEILNPTAATMDVLKRVQLPSGVDIEIKL
>RS10_MYCLE P30765 mycobacterium leprae. 30s ribosomal protein s10. 7/93
MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGANVVGPVPLPTEKNVYCVIRSPHKYKD
SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ
>RS10_PYRWO P26753 pyrococcus woesei. 30s ribosomal protein s10. 8/92
MQKARIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSAT
FDRWELRVHKRLIDIEADERAMRQIMRIRVPEDVTIEIELIS
>RS10_RAT P09900 rattus norvegicus (rat). 40s ribosomal protein s10. 2/95
MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE
QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGPEGERPARFTRG
EADRDTYRRSAVPPGADKKAEAGAGSATEFQFRGGFGRGRGQPPQ

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Last updated : 1/20/2000