BLAST output to FASTA format


BLAST to FASTA Instructions

Converts output from NCBI BLAST to FASTA format

Get rid of the headers and the parameters at the end, leave only the alignments.

We assume the first BLAST fragment is the longest possible fragment (so as to know how many gaps to pad the ends of shorter fragments with)

Enter BLAST output:




References
Last updated : 1/20/2000